BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A04SP1|AL428475
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1397 1746 0.0
>3x_Contig1397
Length = 8011
Score = 1746 bits (879), Expect = 0.0
Identities = 891/896 (99%), Gaps = 1/896 (0%)
Strand = Plus / Plus
Query: 1 gatcttcattacctttgtccttcgtgtcaantgcattttaacaaacgcagttgangctaa 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 692 gatcttcattacctttgtccttcgtgtcaactgcattttaacaaacgcagttga-gctaa 750
Query: 61 gaaaaaaacgcgcacaggcaaaacatgagagacagagaaggatttcaaagtgcaaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gaaaaaaacgcgcacaggcaaaacatgagagacagagaaggatttcaaagtgcaaattat 810
Query: 121 taattgtttgcgattttggttcattatcccccgttgatgcgtgttttttcctggcatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 taattgtttgcgattttggttcattatcccccgttgatgcgtgttttttcctggcatagt 870
Query: 181 taaagttcttcctgaattaggtctgtaaaaagtgctgtttagaagtaataaaattccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 taaagttcttcctgaattaggtctgtaaaaagtgctgtttagaagtaataaaattccatt 930
Query: 241 gctctcagcatacttcattttcggtataaaaaaggaatgtgtcaggcaaaaggacttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gctctcagcatacttcattttcggtataaaaaaggaatgtgtcaggcaaaaggacttcta 990
Query: 301 agtttcaaacaatcattgtttatgaaagaaagaaaggaagaaagaaaagaagagtgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 agtttcaaacaatcattgtttatgaaagaaagaaaggaagaaagaaaagaagagtgaaga 1050
Query: 361 ggctaacatccatacgttgttagtcttaattcttttttttttttaggrtttttatcagca 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1051 ggctaacatccatacgttgttagtcttaattcttttttttttttaggatttttatcagca 1110
Query: 421 tttttatcatttttttgggggtttttaataatgggaatagtttataatcatcgaacgtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 tttttatcatttttttgggggtttttaataatgggaatagtttataatcatcgaacgtcg 1170
Query: 481 ggtgcatgcacactcagacagactcgttatgagcagccattgtccaaatcagccgacaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 ggtgcatgcacactcagacagactcgttatgagcagccattgtccaaatcagccgacaat 1230
Query: 541 tcgtcacgcgtatagttgaactatttttttmatgtttttttgttaacgttgtcttgttgt 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1231 tcgtcacgcgtatagttgaactatttttttaatgtttttttgttaacgttgtcttgttgt 1290
Query: 601 atatttkcgttttcctcagtaagctgagaaacagtagtagttttgattaacctgttgttg 660
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 atattttcgttttcctcagtaagctgagaaacagtagtagttttgattaacctgttgttg 1350
Query: 661 ttgatgatgatcgttccaaaaaggttgttgaggttgctcataatagttcacattgtcata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 ttgatgatgatcgttccaaaaaggttgttgaggttgctcataatagttcacattgtcata 1410
Query: 721 gttctttggtctagggctgtattgggaaggtggagagcagttgaattgtttttggtaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 gttctttggtctagggctgtattgggaaggtggagagcagttgaattgtttttggtaacc 1470
Query: 781 gttattataggagtaacttctcaagtcagaataaaccggtgatgaataagccatcgagga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1471 gttattataggagtaacttctcaagtcagaataaaccggtgatgaataagccatcgagga 1530
Query: 841 atgtccacagtttggtgtttgataaccataggccatcgacgaggcagatgaatact 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1531 atgtccacagtttggtgtttgataaccataggccatcgacgaggcagatgaatact 1586
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,491
Number of Sequences: 1807
Number of extensions: 14491
Number of successful extensions: 182
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)